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Genetics and Genomics

Role of mobile genes in the community interactions of the intestinal microbiota

Our intestinal microbial community is quickly evolving with us, following changes to modern lifestyles and even throughout our lifetimes. I aim to understand how horizontal gene transfer shapes interactions in the microbiota and the implications of this pervasive phenomenon for community properties relevant to human health (e.g. resilience of a healthy microbiota to perturbations). I identified a large conjugative plasmid that frequently transfers to multiple species within a person and mediates the formation of multi-species biofilms.

How does the brain know it’s cold?

Mammals maintain stable body temperature largely independent of the temperature of their environment and even small deviations from optimal internal temperature can threaten their survival. Thermoregulation critically depends on the ability to sense deep body temperature by the intrinsically warm and cold-sensitive neurons in the preoptic area of the hypothalamus (POA). However, the precise physiological roles of the temperature-sensitive POA neurons and the molecular mechanisms responsible for their temperature sensitivity are poorly understood.

A tale of two toxins: The acquisition of defensive toxins by animals through horizontal gene transfer

Several disease-causing bacteria produce toxins that damage host cells by triggering preprogrammed cell death. Two such bacterial toxins are called cytolethal distending toxin B and apoptosis-inducing protein of 56 kDa. We discovered that diverse insect species co-opted the two bacterial genes encoding each cytotoxin through a phenomenon called horizontal gene transfer (HGT). HGT occurs when a gene from one organism is inserted into the genome of another and then is stably inherited across generations.

Is being spineless really a bad thing? The physiology of aquatic invertebrates in challenging and changing environment

Osmoregulation and ion regulation are essential features for normal physiological functions in animals. Using integrative approaches to describe coordinated cellular and organ-level mechanisms with physiological traits, my research broadly examines fundamental features that allow invertebrate animals to adapt to fluctuating environmental conditions. My talk will focus on work examining the interplay of anthropogenic disturbances and ion regulation in two different arthropod groups, amphipods and mosquitoes.

Embracing the complexity: phylogenetic approaches to studying plant diversity

The study of systematics integrates diverse fields of biology including taxonomy, computational biology, genomics, and natural history collections. My research uses these approaches to address fundamental questions about the evolution of tropical plants. In this seminar, I will discuss two major research areas: (1) What processes govern the generation and distribution of tropical biodiversity and (2) are seemingly convergent morphologies produced through similar anatomical and molecular modifications and do they perform similar functions?

Phylogenetic methods for evolutionary mechanisms

Plants are amazing survival artists capable of enduring harsh environments and thriving in newly opened niches. My research seeks to broadly understand how environmental changes and biological interactions re-model the genealogical histories across the plant’s genome, with the aim of identifying key innovations responsible for adaptive changes. At the macroevolutionary scale, I will demonstrate how whole genome duplications buffered plants through a historical global warming, and how ancient gene flows created hyperdiverse clades in the neotropics and Chinese Hengduan Mountains.

Novel perspectives on the evolution of the world's richest flora: insights from extreme botany

How landscape change has shaped patterns of diversity on Earth is a central question in Biology. In Plant Systematics, a great volume of research on this problem has centered on how major geological events shaped the evolution of the Neotropical flora (the world’s richest flora). In this talk, I will show how I rely on natural history observations as a powerful tool for identifying plant groups whose biology make them ideal model systems for approaching long-standing questions from unexplored angles.

#Mollusk Monday: developing new tools and model organisms for biological research using mollusks

Molluscs are familiar invertebrates, from the humble garden slug, to the colorful shells picked up on the beach, to the mercurial shell-less octopus. Being one of the largest, most diverse, and beautiful groups of marine animals, molluscs have been cultivated by humans for centuries for the valuable materials they make (think pearls) and for the nutritious food they provide (menu items such as pulpo, escargot, moules).

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