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2010
Amemiya CT, Powers TP, Prohaska SJ, Grimwood J, Schmutz J, Dickson M, Miyake T, Schoenborn MA, Myers RM, Ruddle FH et al..  2010.  Complete HOX cluster characterization of the coelacanth provides further evidence for slow evolution of its genome. PNAS. 107(8):3622-3627.
2009
Danilova N, Amemiya CT.  2009.  Going adaptive: the saga of antibodies. Ann N Y Acad Sci.. 1168:130-155.
Smith JJ, Antonacci F, Eichler EE, Amemiya CT.  2009.  Programmed loss of millions of base pairs from a vertebrate genome. PNAS. 106(27):11212-11217.
2007
Amemiya CT, Saha NR, Zapata A.  2007.  Evolution and development of immunological structures in the lamprey. Curr Opin Immunol. 19(5):535-541.